Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015941264.1_cds_XP_016485224.1_76170
CDS Infomation

[gene=LOC107805665] [db_xref=GeneID:107805665] [protein=putative pentatricopeptide repeat-containing protein At1g10330] [protein_id=XP_016485224.1] [location=19328..20731] [gbkey=CDS]
Sequence

ATGCCAAACCCAAAGAAACCAGAACATATGCTCCAACTTCTGCAGCATTTCATCAAACAC
TCAAACCAAATCAAGCAAATACATTCCCTTCTCACAACCAGTGGCCGTCTCCTCCTTACC
TCTCAATGGATCAACACACTTCTTTATAACACTCTCATCAGAGCTTACCTCAACATTTCC
CAGCCTCAAACAACTCTCATCCTTTTCACACACATGCTTTTTCATCAAGCTCAACCAAAT
AGCCATACTTTCCCTTCCCTTATCAAAGCAGCATCATCTTTCCCGCCCCATTTGGCTTCC
CATATAGGCAAACCCCTTCACTGTCAAGTCTTGAGAAGAGGGGTGTTGAGTGACCCCTAC
GTGTGTACATCTTTTATTGGGTTGTATTCTCACGCGTGTGAACTCGGGAGTGCGCACAAG
ATGTTTGATGAAATTCCTGAACCATGCGTTGTTTCCTATAATGCGATGCTTGATGCCTGT
GGGAAAAATGGGGATATGGGTTTGGGTTTTTTGATGTTTTCTCGCATGCCTTACAGAGAT
GTTTATTCATGGACTAGTATGATTCATGGGTACATGAAGAATGGGTGCTCTGAAGTTGCT
GTTAAGTTTTTCCAGCGAATGATGATTCATGAGGATGTGAAGTGTGGTTTAATGAAGCCA
AATGAGGCTACTTTTGTTAGTGTTCTTTCTTCTTTCACGTTTTTGGATGTTAGTGTGGCG
TTATATTTAGGGAGGCAAGTACATGCTTACATGGTAAAGAATGAGGAGTTGAGTGTCTTC
ATGACGACCGCGTTGATTGCGTTTTATGGGAAGATGGGTTGTATGGTATATGCTTCAAAG
GTATTCGATGCAATGGTTATCAAGCAGGTTTGTGCTTGGAATGCTATGATTTCTTCCCTA
GCTTTGAATGGTAGAGAGAAGCAGGCATTAATGATGTATGAGAAGATGAGAGCAAGGGGG
CTGCAACCAAATGATATTACATTCGTGGCAGTTCTATCAGCTTGTGCGCGTGCCAAGCTT
GTTGATTTGGGGTTTAAATTGTTTGAAAAAATGTCGCATGAATTTGGACTTGTACCTAAG
ATGGAACATTATGGTTGTGTTGTTGATCTCTTAGGGAGAGCTGGGCTACTGCAAGAAGCA
TATGACTTTATAAAAAAGATGCCTTTTAAAGCTGATGCCACTGTCTTGGGTGCGCTGATG
GGTGCTTGTAGACTTTATGGAGGCATTGAGCTGGGAAATGAAGTAGCACAACTATTGCTT
AAGTCGCAACCGAGTCATTCTGGGCGATACGTGCAACTCTCAAGCATTTATGCTGGGGCA
GAGAGGTGGGATCATGCTGCTGCCTTGAGAAAAGCAATGTTAGATGCTGGAATACACAAG
GTTCCAGCCCACAGTTTTATTTAG

Peptide Sequence

PEP ID

XP_016485224.1
PEP Infomation

PREDICTED: putative pentatricopeptide repeat-containing protein At1g10330 [Nicotiana tabacum]
Sequence

MPNPKKPEHMLQLLQHFIKHSNQIKQIHSLLTTSGRLLLTSQWINTLLYNTLIRAYLNIS
QPQTTLILFTHMLFHQAQPNSHTFPSLIKAASSFPPHLASHIGKPLHCQVLRRGVLSDPY
VCTSFIGLYSHACELGSAHKMFDEIPEPCVVSYNAMLDACGKNGDMGLGFLMFSRMPYRD
VYSWTSMIHGYMKNGCSEVAVKFFQRMMIHEDVKCGLMKPNEATFVSVLSSFTFLDVSVA
LYLGRQVHAYMVKNEELSVFMTTALIAFYGKMGCMVYASKVFDAMVIKQVCAWNAMISSL
ALNGREKQALMMYEKMRARGLQPNDITFVAVLSACARAKLVDLGFKLFEKMSHEFGLVPK
MEHYGCVVDLLGRAGLLQEAYDFIKKMPFKADATVLGALMGACRLYGGIELGNEVAQLLL
KSQPSHSGRYVQLSSIYAGAERWDHAAALRKAMLDAGIHKVPAHSFI

Transcript Sequence

Gene sequence data has not been registered.